Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 AC011498.5-201ENST00000592027 486 ntBASIC17■□□□□ 0.31
CDH13P55290 AC005336.2-201ENST00000593183 939 ntBASIC17■□□□□ 0.31
CDH13P55290 IGHV3-41-201ENST00000613121 348 ntBASIC17■□□□□ 0.31
CDH13P55290 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17■□□□□ 0.31
CDH13P55290 PCDHA14-201ENST00000506751 2298 ntBASIC17■□□□□ 0.31
CDH13P55290 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH13P55290 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH13P55290 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDH13P55290 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 AL118508.1-201ENST00000613502 2345 ntBASIC16.99■□□□□ 0.31
CDH13P55290 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH13P55290 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH13P55290 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH13P55290 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDH13P55290 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDH13P55290 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH13P55290 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CDH13P55290 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH13P55290 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH13P55290 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH13P55290 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 MYCLP1-201ENST00000372451 1075 ntBASIC16.98■□□□□ 0.31
CDH13P55290 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH13P55290 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH13P55290 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH13P55290 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH13P55290 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH13P55290 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CDH13P55290 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.98■□□□□ 0.31
CDH13P55290 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH13P55290 AL138831.2-201ENST00000606564 490 ntBASIC16.98■□□□□ 0.31
CDH13P55290 AL353801.3-201ENST00000609898 542 ntBASIC16.98■□□□□ 0.31
CDH13P55290 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH13P55290 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH13P55290 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH13P55290 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH13P55290 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH13P55290 AL049757.1-201ENST00000616842 1596 ntBASIC16.98■□□□□ 0.31
CDH13P55290 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH13P55290 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH13P55290 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH13P55290 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH13P55290 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CDH13P55290 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH13P55290 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH13P55290 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms