Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 AC016734.2-201ENST00000624325 1377 ntBASIC18.95■□□□□ 0.62
USP8P40818 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 AL138688.1-201ENST00000624851 1594 ntBASIC18.95■□□□□ 0.62
USP8P40818 ARMC10P1-201ENST00000313754 855 ntBASIC18.95■□□□□ 0.62
USP8P40818 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP8P40818 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.95■□□□□ 0.62
USP8P40818 AC096633.1-201ENST00000422446 749 ntBASIC18.95■□□□□ 0.62
USP8P40818 CHCHD2P8-201ENST00000429873 447 ntBASIC18.95■□□□□ 0.62
USP8P40818 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
USP8P40818 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.95■□□□□ 0.62
USP8P40818 KRT18P35-201ENST00000510488 1269 ntBASIC18.95■□□□□ 0.62
USP8P40818 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.95■□□□□ 0.62
USP8P40818 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.95■□□□□ 0.62
USP8P40818 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 AC116407.4-201ENST00000623319 1061 ntBASIC18.95■□□□□ 0.62
USP8P40818 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP8P40818 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
USP8P40818 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.95■□□□□ 0.62
USP8P40818 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.94■□□□□ 0.62
USP8P40818 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
USP8P40818 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP8P40818 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.94■□□□□ 0.62
USP8P40818 AD000864.1-201ENST00000624076 2295 ntBASIC18.94■□□□□ 0.62
USP8P40818 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USP8P40818 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP8P40818 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.94■□□□□ 0.62
USP8P40818 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
USP8P40818 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.94■□□□□ 0.62
USP8P40818 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.94■□□□□ 0.62
USP8P40818 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.94■□□□□ 0.62
USP8P40818 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.94■□□□□ 0.62
USP8P40818 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.94■□□□□ 0.62
USP8P40818 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 KRT18P1-202ENST00000452408 1331 ntBASIC18.94■□□□□ 0.62
USP8P40818 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.94■□□□□ 0.62
USP8P40818 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP8P40818 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.93■□□□□ 0.62
USP8P40818 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.93■□□□□ 0.62
USP8P40818 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
USP8P40818 AL023806.1-201ENST00000603994 1649 ntBASIC18.93■□□□□ 0.62
USP8P40818 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP8P40818 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP8P40818 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 AL845331.1-201ENST00000424978 1190 ntBASIC18.93■□□□□ 0.62
USP8P40818 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 TSSC2-201ENST00000450217 709 ntBASIC18.93■□□□□ 0.62
USP8P40818 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.93■□□□□ 0.62
USP8P40818 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.93■□□□□ 0.62
USP8P40818 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP8P40818 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.93■□□□□ 0.62
USP8P40818 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP8P40818 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
USP8P40818 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.93■□□□□ 0.62
USP8P40818 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms