Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC6A4P31645 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC6A4P31645 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC6A4P31645 AC004790.2-201ENST00000623588 572 ntBASIC17.77■□□□□ 0.44
SLC6A4P31645 PP12613-201ENST00000424958 2230 ntBASIC17.77■□□□□ 0.44
SLC6A4P31645 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLC6A4P31645 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A4P31645 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A4P31645 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC6A4P31645 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
SLC6A4P31645 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SLC6A4P31645 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
SLC6A4P31645 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A4P31645 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SLC6A4P31645 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC6A4P31645 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC6A4P31645 MED15P5-201ENST00000423150 992 ntBASIC17.76■□□□□ 0.43
SLC6A4P31645 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC6A4P31645 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.76■□□□□ 0.43
SLC6A4P31645 TERC-201ENST00000602385 541 ntBASIC17.76■□□□□ 0.43
SLC6A4P31645 AC027601.4-201ENST00000611259 610 ntBASIC17.76■□□□□ 0.43
SLC6A4P31645 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.76■□□□□ 0.43
SLC6A4P31645 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC6A4P31645 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SLC6A4P31645 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A4P31645 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A4P31645 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC6A4P31645 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
SLC6A4P31645 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC6A4P31645 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A4P31645 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC6A4P31645 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A4P31645 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A4P31645 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC6A4P31645 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A4P31645 PI4KAP1-204ENST00000612579 1703 ntBASIC17.75■□□□□ 0.43
SLC6A4P31645 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A4P31645 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC6A4P31645 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 PGAM5P1-201ENST00000518923 814 ntBASIC17.74■□□□□ 0.43
SLC6A4P31645 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A4P31645 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 MIR4751-201ENST00000578027 74 ntBASIC17.74■□□□□ 0.43
SLC6A4P31645 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms