Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL2P13500 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL2P13500 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL2P13500 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCL2P13500 OR6D1P-203ENST00000641209 4860 ntBASIC15.15■□□□□ 0.02
CCL2P13500 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CCL2P13500 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL2P13500 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CCL2P13500 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL2P13500 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL2P13500 SAPCD2P3-201ENST00000455031 850 ntBASIC15.15■□□□□ 0.02
CCL2P13500 BX005266.1-201ENST00000473402 457 ntBASIC15.15■□□□□ 0.02
CCL2P13500 AC106795.1-205ENST00000512851 1056 ntBASIC15.15■□□□□ 0.02
CCL2P13500 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.15■□□□□ 0.02
CCL2P13500 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL2P13500 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL2P13500 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL2P13500 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL2P13500 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCL2P13500 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL2P13500 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 LTB4R2-202ENST00000528054 3092 ntBASIC15.15■□□□□ 0.02
CCL2P13500 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 AC009336.1-201ENST00000608941 1553 ntBASIC15.15■□□□□ 0.02
CCL2P13500 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL2P13500 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL2P13500 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCL2P13500 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 AC003669.1-201ENST00000334569 611 ntBASIC15.14■□□□□ 0.01
CCL2P13500 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL2P13500 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL2P13500 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL2P13500 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL2P13500 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL2P13500 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCL2P13500 AC108860.2-201ENST00000562760 2183 ntBASIC15.14■□□□□ 0.01
CCL2P13500 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL2P13500 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL2P13500 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL2P13500 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 SPDYE21P-201ENST00000413323 827 ntBASIC15.13■□□□□ 0.01
CCL2P13500 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 AL020989.1-201ENST00000422979 469 ntBASIC15.13■□□□□ 0.01
CCL2P13500 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL2P13500 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL2P13500 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL2P13500 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.13■□□□□ 0.01
CCL2P13500 NKAPP1-205ENST00000585790 367 ntBASIC15.13■□□□□ 0.01
CCL2P13500 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 AL121894.2-201ENST00000602977 491 ntBASIC15.13■□□□□ 0.01
CCL2P13500 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms