Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Kcnu1O54982 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Kcnu1O54982 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.32■□□□□ 0.04
Kcnu1O54982 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Kcnu1O54982 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.32■□□□□ 0.04
Kcnu1O54982 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.32■□□□□ 0.04
Kcnu1O54982 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.32■□□□□ 0.04
Kcnu1O54982 Gm25911-201ENSMUST00000157621 56 ntBASIC15.32■□□□□ 0.04
Kcnu1O54982 Gm17271-201ENSMUST00000165535 355 ntBASIC15.32■□□□□ 0.04
Kcnu1O54982 Gm45612-201ENSMUST00000211320 160 ntBASIC15.32■□□□□ 0.04
Kcnu1O54982 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Kcnu1O54982 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.31■□□□□ 0.04
Kcnu1O54982 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.31■□□□□ 0.04
Kcnu1O54982 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.31■□□□□ 0.04
Kcnu1O54982 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Kcnu1O54982 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kcnu1O54982 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Kcnu1O54982 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Kcnu1O54982 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.3■□□□□ 0.04
Kcnu1O54982 Gm11745-201ENSMUST00000121669 448 ntBASIC15.3■□□□□ 0.04
Kcnu1O54982 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.3■□□□□ 0.04
Kcnu1O54982 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.3■□□□□ 0.04
Kcnu1O54982 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.3■□□□□ 0.04
Kcnu1O54982 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.3■□□□□ 0.04
Kcnu1O54982 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kcnu1O54982 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms