Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC005104.2-201ENST00000427818 678 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 KRT18P3-201ENST00000451602 1288 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC122714.2-201ENST00000502787 707 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 RNA5SP415-201ENST00000517246 115 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC040169.1-201ENST00000565382 521 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 MIR3687-2-201ENST00000577708 61 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC140113.2-201ENST00000604370 208 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 MIR3687-1-201ENST00000614492 61 ntBASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TMX2-CTNND1H3BSU7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 RNA5SP416-201ENST00000516838 111 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 PGAM5P1-201ENST00000518923 814 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC034105.1-201ENST00000563488 319 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL356488.2-201ENST00000602755 427 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 MIR1199-201ENST00000621445 119 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL022326.1-202ENST00000641533 845 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC079781.4-201ENST00000641908 219 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL391005.1-201ENST00000623953 2435 ntBASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMX2-CTNND1H3BSU7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC022898.2-201ENST00000616822 1312 ntBASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC096633.1-201ENST00000422446 749 ntBASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC103564.2-201ENST00000432853 1299 ntBASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC092183.1-201ENST00000469884 875 ntBASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.06■□□□□ 0.32
TMX2-CTNND1H3BSU7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TMX2-CTNND1H3BSU7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms