Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 GPX1P2-201ENST00000429271 606 ntBASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AC006557.2-201ENST00000592985 1240 ntBASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AC108860.2-201ENST00000562760 2183 ntBASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 AC112482.1-201ENST00000492080 688 ntBASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC6Q9UBN7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 AC005593.1-201ENST00000624894 515 ntBASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HDAC6Q9UBN7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms