Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Gm11803-201ENSMUST00000119966 444 ntBASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Gm12882-201ENSMUST00000121696 517 ntBASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Gm26464-201ENSMUST00000157094 305 ntBASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx54Q8K4L0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ddx54Q8K4L0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Mir877-201ENSMUST00000104738 85 ntBASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx54Q8K4L0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Gm26083-201ENSMUST00000157904 193 ntBASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Gm43758-201ENSMUST00000199500 367 ntBASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Gm9176-201ENSMUST00000219955 1120 ntBASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx54Q8K4L0 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms