Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Gm44967-201ENSMUST00000207047 631 ntBASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Gm5884-201ENSMUST00000036712 1479 ntBASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pabpn1Q8CCS6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pabpn1Q8CCS6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
Pabpn1Q8CCS6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pabpn1Q8CCS6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Gm11597-201ENSMUST00000121423 964 ntBASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Gm16479-201ENSMUST00000121706 932 ntBASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpn1Q8CCS6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Gm38317-201ENSMUST00000195564 343 ntBASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Gm21009-201ENSMUST00000197169 1669 ntBASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpn1Q8CCS6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Gm45684-201ENSMUST00000210244 1571 ntBASIC21.87■■□□□ 1.09
Pabpn1Q8CCS6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Gm3890-201ENSMUST00000182416 207 ntBASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 AC126253.1-202ENSMUST00000226732 835 ntBASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpn1Q8CCS6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Gm14208-201ENSMUST00000119645 678 ntBASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Gm45770-201ENSMUST00000212105 616 ntBASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Gm5049-201ENSMUST00000195878 1590 ntBASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpn1Q8CCS6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpn1Q8CCS6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpn1Q8CCS6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpn1Q8CCS6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpn1Q8CCS6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms