Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RDH16O75452 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RDH16O75452 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.46■□□□□ 0.22
RDH16O75452 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RDH16O75452 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RDH16O75452 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RDH16O75452 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RDH16O75452 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RDH16O75452 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.45■□□□□ 0.22
RDH16O75452 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 AL031284.1-201ENST00000419297 478 ntBASIC16.45■□□□□ 0.22
RDH16O75452 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.45■□□□□ 0.22
RDH16O75452 PRYP5-201ENST00000451909 266 ntBASIC16.45■□□□□ 0.22
RDH16O75452 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.45■□□□□ 0.22
RDH16O75452 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
RDH16O75452 AC097637.2-201ENST00000624096 1997 ntBASIC16.45■□□□□ 0.22
RDH16O75452 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.45■□□□□ 0.22
RDH16O75452 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RDH16O75452 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.45■□□□□ 0.22
RDH16O75452 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
RDH16O75452 AL135999.2-201ENST00000622438 1686 ntBASIC16.44■□□□□ 0.22
RDH16O75452 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.44■□□□□ 0.22
RDH16O75452 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 AC079776.4-201ENST00000511039 504 ntBASIC16.44■□□□□ 0.22
RDH16O75452 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.44■□□□□ 0.22
RDH16O75452 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.44■□□□□ 0.22
RDH16O75452 AP001005.1-201ENST00000571755 1248 ntBASIC16.44■□□□□ 0.22
RDH16O75452 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 AL049840.3-201ENST00000602669 611 ntBASIC16.44■□□□□ 0.22
RDH16O75452 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 MIR7706-201ENST00000613747 67 ntBASIC16.44■□□□□ 0.22
RDH16O75452 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.44■□□□□ 0.22
RDH16O75452 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.44■□□□□ 0.22
RDH16O75452 FAM215A-202ENST00000632077 792 ntBASIC16.44■□□□□ 0.22
RDH16O75452 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RDH16O75452 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
RDH16O75452 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RDH16O75452 PCDHB18P-201ENST00000524813 2368 ntBASIC16.44■□□□□ 0.22
RDH16O75452 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RDH16O75452 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RDH16O75452 HLA-A-201ENST00000376802 1334 ntBASIC16.44■□□□□ 0.22
RDH16O75452 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RDH16O75452 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RDH16O75452 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RDH16O75452 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RDH16O75452 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.43■□□□□ 0.22
RDH16O75452 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
RDH16O75452 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RDH16O75452 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RDH16O75452 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RDH16O75452 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms