Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YME1L1Q96TA2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 AC005237.2-201ENST00000434368 219 ntBASIC18.59■□□□□ 0.57
YME1L1Q96TA2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 RNA5SP421-201ENST00000516864 134 ntBASIC18.59■□□□□ 0.57
YME1L1Q96TA2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 FAM86C2P-203ENST00000528684 1004 ntBASIC18.59■□□□□ 0.57
YME1L1Q96TA2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 AC069262.1-201ENST00000539058 672 ntBASIC18.59■□□□□ 0.57
YME1L1Q96TA2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 AC093520.2-201ENST00000561830 333 ntBASIC18.59■□□□□ 0.57
YME1L1Q96TA2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 AC009093.7-201ENST00000623853 1223 ntBASIC18.59■□□□□ 0.57
YME1L1Q96TA2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
YME1L1Q96TA2 HTR7P1-202ENST00000624664 4411 ntBASIC18.58■□□□□ 0.57
YME1L1Q96TA2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YME1L1Q96TA2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 AL355306.1-201ENST00000415580 579 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 AL671277.1-201ENST00000429656 993 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 SPDYE11-202ENST00000450699 704 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 AC093214.1-201ENST00000511688 1107 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 SPDYE9P-201ENST00000570642 692 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 SPDYE10P-202ENST00000612005 668 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 SPDYE8P-202ENST00000612377 668 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 Z92544.3-201ENST00000624747 417 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.58■□□□□ 0.56
YME1L1Q96TA2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
YME1L1Q96TA2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 AC129492.6-201ENST00000611383 1305 ntBASIC18.57■□□□□ 0.56
YME1L1Q96TA2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 PMS2P4-201ENST00000412466 1052 ntBASIC18.57■□□□□ 0.56
YME1L1Q96TA2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 AC015911.4-201ENST00000588022 1070 ntBASIC18.57■□□□□ 0.56
YME1L1Q96TA2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms