Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Col10a1Q05306 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.34□□□□□ -0.27
Col10a1Q05306 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.34□□□□□ -0.27
Col10a1Q05306 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.34□□□□□ -0.27
Col10a1Q05306 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col10a1Q05306 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.34□□□□□ -0.27
Col10a1Q05306 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col10a1Q05306 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col10a1Q05306 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.33□□□□□ -0.28
Col10a1Q05306 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.33□□□□□ -0.28
Col10a1Q05306 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.33□□□□□ -0.28
Col10a1Q05306 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.33□□□□□ -0.28
Col10a1Q05306 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col10a1Q05306 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.33□□□□□ -0.28
Col10a1Q05306 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.32□□□□□ -0.28
Col10a1Q05306 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Gm14701-201ENSMUST00000117156 348 ntBASIC13.32□□□□□ -0.28
Col10a1Q05306 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.32□□□□□ -0.28
Col10a1Q05306 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.32□□□□□ -0.28
Col10a1Q05306 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col10a1Q05306 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col10a1Q05306 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms