Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
XRCC1P18887 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.4■□□□□ 0.38
XRCC1P18887 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
XRCC1P18887 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.4■□□□□ 0.38
XRCC1P18887 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC1P18887 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
XRCC1P18887 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.4■□□□□ 0.38
XRCC1P18887 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.4■□□□□ 0.38
XRCC1P18887 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC1P18887 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 INTS4P1-201ENST00000438455 1935 ntBASIC17.4■□□□□ 0.38
XRCC1P18887 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
XRCC1P18887 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
XRCC1P18887 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.4■□□□□ 0.38
XRCC1P18887 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.4■□□□□ 0.38
XRCC1P18887 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
XRCC1P18887 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC1P18887 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC1P18887 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC1P18887 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XRCC1P18887 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
XRCC1P18887 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
XRCC1P18887 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
XRCC1P18887 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.39■□□□□ 0.38
XRCC1P18887 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.39■□□□□ 0.37
XRCC1P18887 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 SAPCD2P3-201ENST00000455031 850 ntBASIC17.39■□□□□ 0.37
XRCC1P18887 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 AC104692.2-201ENST00000603054 253 ntBASIC17.39■□□□□ 0.37
XRCC1P18887 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
XRCC1P18887 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
XRCC1P18887 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.39■□□□□ 0.37
XRCC1P18887 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XRCC1P18887 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
XRCC1P18887 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.38■□□□□ 0.37
XRCC1P18887 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.38■□□□□ 0.37
XRCC1P18887 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
XRCC1P18887 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
XRCC1P18887 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.38■□□□□ 0.37
XRCC1P18887 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 AKR1C7P-201ENST00000305623 895 ntBASIC17.38■□□□□ 0.37
XRCC1P18887 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
XRCC1P18887 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.38■□□□□ 0.37
XRCC1P18887 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 AC096633.1-201ENST00000422446 749 ntBASIC17.38■□□□□ 0.37
XRCC1P18887 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 AC132008.2-207ENST00000454517 770 ntBASIC17.38■□□□□ 0.37
XRCC1P18887 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.38■□□□□ 0.37
XRCC1P18887 AL160237.2-201ENST00000556165 472 ntBASIC17.38■□□□□ 0.37
XRCC1P18887 AL121912.1-201ENST00000603683 238 ntBASIC17.38■□□□□ 0.37
XRCC1P18887 AL031008.1-201ENST00000619963 541 ntBASIC17.38■□□□□ 0.37
XRCC1P18887 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.38■□□□□ 0.37
XRCC1P18887 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
XRCC1P18887 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
XRCC1P18887 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 KRT18P55-202ENST00000578578 1546 ntBASIC17.37■□□□□ 0.37
XRCC1P18887 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.37■□□□□ 0.37
XRCC1P18887 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 AF238378.1-201ENST00000526806 358 ntBASIC17.37■□□□□ 0.37
XRCC1P18887 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
XRCC1P18887 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.37■□□□□ 0.37
XRCC1P18887 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
XRCC1P18887 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms