Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 ACTG1P4-201ENST00000425123 1122 ntBASIC19.18■□□□□ 0.66
GAP43P17677 FGFR3P6-201ENST00000457012 610 ntBASIC19.18■□□□□ 0.66
GAP43P17677 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.18■□□□□ 0.66
GAP43P17677 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
GAP43P17677 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAP43P17677 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
GAP43P17677 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GAP43P17677 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
GAP43P17677 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.17■□□□□ 0.66
GAP43P17677 NKAPP1-205ENST00000585790 367 ntBASIC19.17■□□□□ 0.66
GAP43P17677 AL022326.1-202ENST00000641533 845 ntBASIC19.17■□□□□ 0.66
GAP43P17677 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
GAP43P17677 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.17■□□□□ 0.66
GAP43P17677 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GAP43P17677 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GAP43P17677 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAP43P17677 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GAP43P17677 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.16■□□□□ 0.66
GAP43P17677 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GAP43P17677 SCARNA2-201ENST00000458748 420 ntBASIC19.16■□□□□ 0.66
GAP43P17677 BX005266.1-201ENST00000473402 457 ntBASIC19.16■□□□□ 0.66
GAP43P17677 UNC93B7-201ENST00000509439 705 ntBASIC19.16■□□□□ 0.66
GAP43P17677 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.16■□□□□ 0.66
GAP43P17677 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.16■□□□□ 0.66
GAP43P17677 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.16■□□□□ 0.66
GAP43P17677 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.16■□□□□ 0.66
GAP43P17677 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.16■□□□□ 0.66
GAP43P17677 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.16■□□□□ 0.66
GAP43P17677 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GAP43P17677 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.16■□□□□ 0.66
GAP43P17677 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GAP43P17677 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GAP43P17677 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GAP43P17677 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.16■□□□□ 0.66
GAP43P17677 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAP43P17677 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.16■□□□□ 0.66
GAP43P17677 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.16■□□□□ 0.66
GAP43P17677 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.15■□□□□ 0.66
GAP43P17677 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.15■□□□□ 0.66
GAP43P17677 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GAP43P17677 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAP43P17677 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
GAP43P17677 AF238378.1-201ENST00000526806 358 ntBASIC19.15■□□□□ 0.66
GAP43P17677 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.15■□□□□ 0.66
GAP43P17677 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.15■□□□□ 0.66
GAP43P17677 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms