Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 INGX-202ENST00000489074 768 ntBASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AJ011932.1-201ENST00000621707 465 ntBASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 AC015911.4-201ENST00000588022 1070 ntBASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22.93■■□□□ 1.26
CSB-PGBD3P0DP91 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 AC140658.5-201ENST00000438532 169 ntBASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 CNN2P2-201ENST00000443536 909 ntBASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 CNN2P3-201ENST00000450201 906 ntBASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 AL136317.3-201ENST00000618497 906 ntBASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSB-PGBD3P0DP91 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 KRT18P32-201ENST00000424695 1287 ntBASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 AC079140.1-201ENST00000508039 487 ntBASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 AC190387.1-201ENST00000551683 408 ntBASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
CSB-PGBD3P0DP91 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms