Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.57□□□□□ -0.08
Dnmt3aO88508 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dnmt3aO88508 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Gm18737-201ENSMUST00000173594 937 ntBASIC14.56□□□□□ -0.08
Dnmt3aO88508 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Gm27920-201ENSMUST00000183953 96 ntBASIC14.56□□□□□ -0.08
Dnmt3aO88508 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.56□□□□□ -0.08
Dnmt3aO88508 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dnmt3aO88508 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm12134-201ENSMUST00000122109 520 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Mir6990-201ENSMUST00000183724 91 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm44335-201ENSMUST00000196879 141 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm44297-201ENSMUST00000198304 141 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm44346-201ENSMUST00000198851 141 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.55□□□□□ -0.08
Dnmt3aO88508 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Dnmt3aO88508 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Gm9726-201ENSMUST00000180321 678 ntBASIC14.54□□□□□ -0.08
Dnmt3aO88508 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dnmt3aO88508 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms