Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PALM3A6NDB9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 PTCHD3P3-201ENST00000403073 906 ntBASIC20.06■□□□□ 0.8
PALM3A6NDB9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 RPL13AP23-201ENST00000480739 586 ntBASIC20.06■□□□□ 0.8
PALM3A6NDB9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 RNA5SP415-201ENST00000517246 115 ntBASIC20.06■□□□□ 0.8
PALM3A6NDB9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 PGM5P2-202ENST00000637225 1043 ntBASIC20.06■□□□□ 0.8
PALM3A6NDB9 AL805961.1-202ENST00000641562 540 ntBASIC20.06■□□□□ 0.8
PALM3A6NDB9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PALM3A6NDB9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PALM3A6NDB9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 AL022342.1-201ENST00000400363 863 ntBASIC20.05■□□□□ 0.8
PALM3A6NDB9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 UNC93B6-202ENST00000528242 690 ntBASIC20.05■□□□□ 0.8
PALM3A6NDB9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 MIR1199-201ENST00000621445 119 ntBASIC20.05■□□□□ 0.8
PALM3A6NDB9 AC116353.5-201ENST00000638148 1699 ntBASIC20.05■□□□□ 0.8
PALM3A6NDB9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PALM3A6NDB9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 CROCCP2-202ENST00000412962 2773 ntBASIC20.05■□□□□ 0.8
PALM3A6NDB9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
PALM3A6NDB9 BCL2-203ENST00000589955 5011 ntBASIC20.04■□□□□ 0.8
PALM3A6NDB9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 RPS15P9-201ENST00000494093 319 ntBASIC20.04■□□□□ 0.8
PALM3A6NDB9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 AF228730.7-201ENST00000641842 219 ntBASIC20.04■□□□□ 0.8
PALM3A6NDB9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PALM3A6NDB9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PALM3A6NDB9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PALM3A6NDB9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PALM3A6NDB9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PALM3A6NDB9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.03■□□□□ 0.8
PALM3A6NDB9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PALM3A6NDB9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.03■□□□□ 0.8
PALM3A6NDB9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PALM3A6NDB9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PALM3A6NDB9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PALM3A6NDB9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms