Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 AC079781.3-201ENST00000449110 356 ntBASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.2■□□□□ 0.99
ECHDC1Q9NTX5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 AC097637.2-201ENST00000624096 1997 ntBASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 AC004870.1-201ENST00000315132 882 ntBASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 FAAHP1-202ENST00000446499 1238 ntBASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 AC021087.4-201ENST00000563761 564 ntBASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 TP73-AS1-207ENST00000624167 988 ntBASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.2■□□□□ 0.98
ECHDC1Q9NTX5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 AC093525.9-201ENST00000624961 1746 ntBASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 MTDHP4-201ENST00000600287 670 ntBASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ECHDC1Q9NTX5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 ACTG1P4-201ENST00000425123 1122 ntBASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 AC064862.7-201ENST00000604520 867 ntBASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 AC025062.2-201ENST00000605477 670 ntBASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 AL031008.1-201ENST00000619963 541 ntBASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms