Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AL355877.3-201ENST00000622820 899 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 KRT8P47-201ENST00000604727 1398 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC009113.1-201ENST00000570267 2443 ntBASIC12.16□□□□□ -0.46
UPK3BQ9BT76 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC103564.2-201ENST00000432853 1299 ntBASIC12.16□□□□□ -0.46
UPK3BQ9BT76 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC079781.3-201ENST00000449110 356 ntBASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AF238378.1-201ENST00000526806 358 ntBASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK3BQ9BT76 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 AC008894.3-201ENST00000624324 3103 ntBASIC12.15□□□□□ -0.46
UPK3BQ9BT76 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.15□□□□□ -0.46
UPK3BQ9BT76 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK3BQ9BT76 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms