Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 SIGLEC16-201ENST00000599858 1437 ntBASIC20.37■□□□□ 0.85
TRIM47Q96LD4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 MKNK2P1-201ENST00000437526 628 ntBASIC20.37■□□□□ 0.85
TRIM47Q96LD4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 AC027612.4-201ENST00000605371 583 ntBASIC20.37■□□□□ 0.85
TRIM47Q96LD4 AD001527.2-201ENST00000622994 785 ntBASIC20.37■□□□□ 0.85
TRIM47Q96LD4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.37■□□□□ 0.85
TRIM47Q96LD4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
TRIM47Q96LD4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 SPDYE21P-201ENST00000413323 827 ntBASIC20.36■□□□□ 0.85
TRIM47Q96LD4 VN2R19P-201ENST00000442399 1052 ntBASIC20.36■□□□□ 0.85
TRIM47Q96LD4 CEND1P1-201ENST00000451006 455 ntBASIC20.36■□□□□ 0.85
TRIM47Q96LD4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 PCDHB18P-201ENST00000524813 2368 ntBASIC20.36■□□□□ 0.85
TRIM47Q96LD4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 GPR89P-201ENST00000407924 1495 ntBASIC20.36■□□□□ 0.85
TRIM47Q96LD4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM47Q96LD4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 REXO1L9P-201ENST00000604264 2108 ntBASIC20.35■□□□□ 0.85
TRIM47Q96LD4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 ELK2BP-201ENST00000415014 1224 ntBASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 HCG4B-203ENST00000450128 991 ntBASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AC108073.2-201ENST00000464002 357 ntBASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SPCS2P1-201ENST00000561636 679 ntBASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AL589182.2-201ENST00000619332 1049 ntBASIC20.35■□□□□ 0.85
TRIM47Q96LD4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms