Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 AL023806.1-201ENST00000603994 1649 ntBASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 KRT8P10-201ENST00000450021 1447 ntBASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 AC139713.2-201ENST00000641328 2723 ntBASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 CROCCP2-202ENST00000412962 2773 ntBASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 AL049757.1-201ENST00000616842 1596 ntBASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP3Q96JB5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 AC106820.2-201ENST00000563775 3264 ntBASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP3Q96JB5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 FOSL1P1-201ENST00000511041 816 ntBASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDK5RAP3Q96JB5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms