Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 AC024909.3-201ENST00000611513 2257 ntBASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 PAUPAR-201ENST00000630360 2965 ntBASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 AL365203.3-201ENST00000609742 2057 ntBASIC14.93□□□□□ -0.02
SMIM4Q8WVI0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 KRT18P65-201ENST00000439811 1286 ntBASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms