Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubqln1Q8R317 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Gm6973-201ENSMUST00000117080 721 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Gm15483-201ENSMUST00000120338 456 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Gm45098-201ENSMUST00000207179 657 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubqln1Q8R317 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Gm5479-201ENSMUST00000160578 435 ntBASIC13.72□□□□□ -0.21
Ubqln1Q8R317 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubqln1Q8R317 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubqln1Q8R317 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms