Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH20Q8N6Y1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 SIGLEC16-201ENST00000599858 1437 ntBASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 AC099398.1-201ENST00000567919 2776 ntBASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
PCDH20Q8N6Y1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 AC005104.2-201ENST00000427818 678 ntBASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 AL773604.1-201ENST00000617417 272 ntBASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH20Q8N6Y1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 AC003669.1-201ENST00000334569 611 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 MYCLP1-201ENST00000372451 1075 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 SPDYE21P-201ENST00000413323 827 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 AC018712.1-201ENST00000455767 687 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 RNPS1P1-201ENST00000507437 918 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 NKAPP1-205ENST00000585790 367 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH20Q8N6Y1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH20Q8N6Y1 AC021087.4-201ENST00000563761 564 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms