Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Gm9002-201ENSMUST00000178437 499 ntBASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Gm9229-201ENSMUST00000222777 126 ntBASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ptcd1Q8C2E4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.79■□□□□ 0.44
Ptcd1Q8C2E4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ptcd1Q8C2E4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms