Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.57■□□□□ 0.24
Vcam1P29533 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vcam1P29533 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vcam1P29533 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vcam1P29533 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.57■□□□□ 0.24
Vcam1P29533 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vcam1P29533 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Gm44608-201ENSMUST00000206827 855 ntBASIC16.57■□□□□ 0.24
Vcam1P29533 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.57■□□□□ 0.24
Vcam1P29533 Gm45384-201ENSMUST00000210451 277 ntBASIC16.57■□□□□ 0.24
Vcam1P29533 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vcam1P29533 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Vcam1P29533 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vcam1P29533 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.56■□□□□ 0.24
Vcam1P29533 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.56■□□□□ 0.24
Vcam1P29533 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.56■□□□□ 0.24
Vcam1P29533 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vcam1P29533 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.56■□□□□ 0.24
Vcam1P29533 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.56■□□□□ 0.24
Vcam1P29533 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.56■□□□□ 0.24
Vcam1P29533 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.56■□□□□ 0.24
Vcam1P29533 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcam1P29533 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Vcam1P29533 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Mir6392-201ENSMUST00000184924 108 ntBASIC16.55■□□□□ 0.24
Vcam1P29533 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.55■□□□□ 0.24
Vcam1P29533 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Gm19220-201ENSMUST00000222682 803 ntBASIC16.55■□□□□ 0.24
Vcam1P29533 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.55■□□□□ 0.24
Vcam1P29533 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcam1P29533 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Vcam1P29533 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.54■□□□□ 0.24
Vcam1P29533 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.54■□□□□ 0.24
Vcam1P29533 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vcam1P29533 Gm4804-201ENSMUST00000182234 999 ntBASIC16.54■□□□□ 0.24
Vcam1P29533 Gm5354-201ENSMUST00000182417 973 ntBASIC16.54■□□□□ 0.24
Vcam1P29533 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vcam1P29533 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.54■□□□□ 0.24
Vcam1P29533 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.54■□□□□ 0.24
Vcam1P29533 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vcam1P29533 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.54■□□□□ 0.24
Vcam1P29533 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcam1P29533 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.53■□□□□ 0.24
Vcam1P29533 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms