Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.69■□□□□ 0.58
TNRC18O15417 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.69■□□□□ 0.58
TNRC18O15417 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.69■□□□□ 0.58
TNRC18O15417 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNRC18O15417 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNRC18O15417 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNRC18O15417 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNRC18O15417 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.69■□□□□ 0.58
TNRC18O15417 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.69■□□□□ 0.58
TNRC18O15417 STK19B-204ENST00000512515 211 ntBASIC18.69■□□□□ 0.58
TNRC18O15417 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.69■□□□□ 0.58
TNRC18O15417 AC023310.3-201ENST00000557027 670 ntBASIC18.69■□□□□ 0.58
TNRC18O15417 AC100756.1-201ENST00000562736 682 ntBASIC18.69■□□□□ 0.58
TNRC18O15417 AC138749.3-201ENST00000567691 622 ntBASIC18.69■□□□□ 0.58
TNRC18O15417 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNRC18O15417 AC116165.1-201ENST00000611806 668 ntBASIC18.69■□□□□ 0.58
TNRC18O15417 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.68■□□□□ 0.58
TNRC18O15417 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.68■□□□□ 0.58
TNRC18O15417 SLC25A24P2-201ENST00000415059 510 ntBASIC18.68■□□□□ 0.58
TNRC18O15417 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.68■□□□□ 0.58
TNRC18O15417 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.68■□□□□ 0.58
TNRC18O15417 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.68■□□□□ 0.58
TNRC18O15417 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.68■□□□□ 0.58
TNRC18O15417 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.68■□□□□ 0.58
TNRC18O15417 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.68■□□□□ 0.58
TNRC18O15417 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.68■□□□□ 0.58
TNRC18O15417 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 FAM21FP-201ENST00000426241 1131 ntBASIC18.68■□□□□ 0.58
TNRC18O15417 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.68■□□□□ 0.58
TNRC18O15417 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNRC18O15417 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.68■□□□□ 0.58
TNRC18O15417 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.67■□□□□ 0.58
TNRC18O15417 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.67■□□□□ 0.58
TNRC18O15417 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.67■□□□□ 0.58
TNRC18O15417 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
TNRC18O15417 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TNRC18O15417 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 AC007375.3-201ENST00000600936 2314 ntBASIC18.67■□□□□ 0.58
TNRC18O15417 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.67■□□□□ 0.58
TNRC18O15417 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.67■□□□□ 0.58
TNRC18O15417 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TNRC18O15417 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.67■□□□□ 0.58
TNRC18O15417 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNRC18O15417 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.67■□□□□ 0.58
TNRC18O15417 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 PFN1P12-201ENST00000455938 534 ntBASIC18.67■□□□□ 0.58
TNRC18O15417 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.67■□□□□ 0.58
TNRC18O15417 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.67■□□□□ 0.58
TNRC18O15417 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.67■□□□□ 0.58
TNRC18O15417 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TNRC18O15417 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.67■□□□□ 0.58
TNRC18O15417 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TNRC18O15417 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TNRC18O15417 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.67■□□□□ 0.58
TNRC18O15417 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNRC18O15417 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TNRC18O15417 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.66■□□□□ 0.58
TNRC18O15417 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.66■□□□□ 0.58
TNRC18O15417 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
TNRC18O15417 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.66■□□□□ 0.58
TNRC18O15417 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 RARRES2P9-201ENST00000565168 469 ntBASIC18.66■□□□□ 0.58
TNRC18O15417 AC010319.3-201ENST00000597028 470 ntBASIC18.66■□□□□ 0.58
TNRC18O15417 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNRC18O15417 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.66■□□□□ 0.58
TNRC18O15417 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNRC18O15417 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms