Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.61■□□□□ 0.57
O00370 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 TNRC18P3-201ENST00000441896 2691 ntBASIC18.61■□□□□ 0.57
O00370 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
O00370 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 LYSMD4-203ENST00000378904 2122 ntBASIC18.61■□□□□ 0.57
O00370 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
O00370 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
O00370 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
O00370 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
O00370 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
O00370 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
O00370 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 AL138688.1-201ENST00000624851 1594 ntBASIC18.6■□□□□ 0.57
O00370 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.6■□□□□ 0.57
O00370 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
O00370 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
O00370 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.6■□□□□ 0.57
O00370 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.6■□□□□ 0.57
O00370 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.6■□□□□ 0.57
O00370 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
O00370 MYCLP1-201ENST00000372451 1075 ntBASIC18.6■□□□□ 0.57
O00370 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.6■□□□□ 0.57
O00370 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.6■□□□□ 0.57
O00370 UNC93B7-201ENST00000509439 705 ntBASIC18.6■□□□□ 0.57
O00370 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.6■□□□□ 0.57
O00370 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.6■□□□□ 0.57
O00370 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
O00370 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.6■□□□□ 0.57
O00370 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
O00370 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
O00370 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
O00370 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.6■□□□□ 0.57
O00370 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
O00370 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.59■□□□□ 0.57
O00370 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.59■□□□□ 0.57
O00370 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.59■□□□□ 0.57
O00370 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
O00370 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.59■□□□□ 0.57
O00370 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.59■□□□□ 0.57
O00370 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.59■□□□□ 0.57
O00370 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.59■□□□□ 0.57
O00370 IFNL4P1-201ENST00000607083 540 ntBASIC18.59■□□□□ 0.57
O00370 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
O00370 AC073592.5-201ENST00000624854 528 ntBASIC18.59■□□□□ 0.57
O00370 AC084018.2-201ENST00000613093 2607 ntBASIC18.59■□□□□ 0.57
O00370 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
O00370 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
O00370 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.58■□□□□ 0.57
O00370 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.58■□□□□ 0.57
O00370 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.58■□□□□ 0.57
O00370 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
O00370 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.58■□□□□ 0.57
O00370 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
O00370 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.58■□□□□ 0.57
O00370 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
O00370 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
O00370 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
O00370 AKR1C7P-201ENST00000305623 895 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms