Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc9Q8VC31 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Gm7213-201ENSMUST00000215977 950 ntBASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 AC125108.1-201ENSMUST00000218986 2330 ntBASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Gm43321-201ENSMUST00000198897 2409 ntBASIC17.48■□□□□ 0.39
Ccdc9Q8VC31 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc9Q8VC31 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Gm18115-201ENSMUST00000221209 621 ntBASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Gm20633-201ENSMUST00000176742 2831 ntBASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc9Q8VC31 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc9Q8VC31 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc9Q8VC31 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc9Q8VC31 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms