Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 STARP1-201ENST00000397973 869 ntBASIC17.59■□□□□ 0.41
RAPH1Q70E73 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 AL137013.1-201ENST00000432946 1228 ntBASIC17.59■□□□□ 0.41
RAPH1Q70E73 HLA-F-220ENST00000434407 884 ntBASIC17.59■□□□□ 0.41
RAPH1Q70E73 AP003733.1-201ENST00000491725 852 ntBASIC17.59■□□□□ 0.41
RAPH1Q70E73 ZNF444P1-201ENST00000559497 298 ntBASIC17.59■□□□□ 0.41
RAPH1Q70E73 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 AC011558.1-201ENST00000623459 338 ntBASIC17.59■□□□□ 0.41
RAPH1Q70E73 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAPH1Q70E73 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAPH1Q70E73 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAPH1Q70E73 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAPH1Q70E73 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAPH1Q70E73 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAPH1Q70E73 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.58■□□□□ 0.41
RAPH1Q70E73 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAPH1Q70E73 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
RAPH1Q70E73 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 AC139887.4-201ENST00000607877 719 ntBASIC17.58■□□□□ 0.4
RAPH1Q70E73 AC005363.2-201ENST00000618631 242 ntBASIC17.58■□□□□ 0.4
RAPH1Q70E73 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 AC133561.5-201ENST00000635547 218 ntBASIC17.58■□□□□ 0.4
RAPH1Q70E73 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
RAPH1Q70E73 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAPH1Q70E73 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 BX664615.1-201ENST00000443558 458 ntBASIC17.57■□□□□ 0.4
RAPH1Q70E73 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAPH1Q70E73 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.57■□□□□ 0.4
RAPH1Q70E73 AC092597.1-201ENST00000487352 616 ntBASIC17.57■□□□□ 0.4
RAPH1Q70E73 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.57■□□□□ 0.4
RAPH1Q70E73 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms