Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 TOB2P1-201ENST00000469761 992 ntBASIC16.86■□□□□ 0.29
PCDH1Q08174 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH1Q08174 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDH1Q08174 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 AC092329.2-201ENST00000598402 547 ntBASIC16.86■□□□□ 0.29
PCDH1Q08174 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 NSUN5P1-202ENST00000421140 1535 ntBASIC16.86■□□□□ 0.29
PCDH1Q08174 NSUN5P2-203ENST00000457352 1529 ntBASIC16.86■□□□□ 0.29
PCDH1Q08174 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH1Q08174 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH1Q08174 AC069148.1-201ENST00000608741 768 ntBASIC16.85■□□□□ 0.29
PCDH1Q08174 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.85■□□□□ 0.29
PCDH1Q08174 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH1Q08174 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH1Q08174 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH1Q08174 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH1Q08174 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH1Q08174 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PCDH1Q08174 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 AC012615.1-201ENST00000565797 1299 ntBASIC16.84■□□□□ 0.29
PCDH1Q08174 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH1Q08174 AC114341.1-201ENST00000618070 349 ntBASIC16.84■□□□□ 0.29
PCDH1Q08174 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH1Q08174 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 AC046185.3-201ENST00000623228 1824 ntBASIC16.84■□□□□ 0.29
PCDH1Q08174 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDH1Q08174 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDH1Q08174 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH1Q08174 AC009053.2-201ENST00000563701 2365 ntBASIC16.84■□□□□ 0.29
PCDH1Q08174 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH1Q08174 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDH1Q08174 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH1Q08174 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH1Q08174 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PCDH1Q08174 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH1Q08174 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH1Q08174 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDH1Q08174 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH1Q08174 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH1Q08174 AC003669.1-201ENST00000334569 611 ntBASIC16.83■□□□□ 0.28
PCDH1Q08174 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH1Q08174 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH1Q08174 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms