Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.95■□□□□ 0.62
SNRPFP62306 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SNRPFP62306 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.95■□□□□ 0.62
SNRPFP62306 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.95■□□□□ 0.62
SNRPFP62306 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SNRPFP62306 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SNRPFP62306 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.95■□□□□ 0.62
SNRPFP62306 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRPFP62306 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNRPFP62306 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 AF238378.1-201ENST00000526806 358 ntBASIC18.94■□□□□ 0.62
SNRPFP62306 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.94■□□□□ 0.62
SNRPFP62306 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.94■□□□□ 0.62
SNRPFP62306 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 AL589182.2-201ENST00000619332 1049 ntBASIC18.94■□□□□ 0.62
SNRPFP62306 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNRPFP62306 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRPFP62306 LINC02012-201ENST00000608206 1725 ntBASIC18.94■□□□□ 0.62
SNRPFP62306 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.94■□□□□ 0.62
SNRPFP62306 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SNRPFP62306 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SNRPFP62306 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.93■□□□□ 0.62
SNRPFP62306 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNRPFP62306 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRPFP62306 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNRPFP62306 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.93■□□□□ 0.62
SNRPFP62306 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRPFP62306 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRPFP62306 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SNRPFP62306 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.93■□□□□ 0.62
SNRPFP62306 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRPFP62306 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNRPFP62306 AC097637.2-201ENST00000624096 1997 ntBASIC18.93■□□□□ 0.62
SNRPFP62306 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRPFP62306 EGFEM1P-202ENST00000431685 1563 ntBASIC18.93■□□□□ 0.62
SNRPFP62306 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNRPFP62306 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 AC004817.3-201ENST00000602957 2129 ntBASIC18.92■□□□□ 0.62
SNRPFP62306 NCF1C-201ENST00000438382 1427 ntBASIC18.92■□□□□ 0.62
SNRPFP62306 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRPFP62306 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.92■□□□□ 0.62
SNRPFP62306 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNRPFP62306 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRPFP62306 AC020916.1-201ENST00000587762 1774 ntBASIC18.92■□□□□ 0.62
SNRPFP62306 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.92■□□□□ 0.62
SNRPFP62306 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SNRPFP62306 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRPFP62306 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRPFP62306 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNRPFP62306 UNC93B7-201ENST00000509439 705 ntBASIC18.92■□□□□ 0.62
SNRPFP62306 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRPFP62306 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms