Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
USP1O94782 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
USP1O94782 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 AC010460.3-201ENST00000511359 1579 ntBASIC17.71■□□□□ 0.43
USP1O94782 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP1O94782 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.71■□□□□ 0.43
USP1O94782 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
USP1O94782 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP1O94782 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP1O94782 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP1O94782 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.71■□□□□ 0.42
USP1O94782 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP1O94782 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP1O94782 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP1O94782 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
USP1O94782 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP1O94782 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 AL645929.1-201ENST00000420084 975 ntBASIC17.7■□□□□ 0.42
USP1O94782 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.7■□□□□ 0.42
USP1O94782 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.7■□□□□ 0.42
USP1O94782 GUSBP12-201ENST00000513727 720 ntBASIC17.7■□□□□ 0.42
USP1O94782 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.7■□□□□ 0.42
USP1O94782 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP1O94782 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 UBALD1-205ENST00000590891 2641 ntBASIC17.7■□□□□ 0.42
USP1O94782 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
USP1O94782 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP1O94782 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.7■□□□□ 0.42
USP1O94782 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP1O94782 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USP1O94782 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.69■□□□□ 0.42
USP1O94782 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USP1O94782 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.69■□□□□ 0.42
USP1O94782 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.69■□□□□ 0.42
USP1O94782 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.69■□□□□ 0.42
USP1O94782 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.69■□□□□ 0.42
USP1O94782 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.69■□□□□ 0.42
USP1O94782 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.69■□□□□ 0.42
USP1O94782 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
USP1O94782 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.69■□□□□ 0.42
USP1O94782 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP1O94782 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP1O94782 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.69■□□□□ 0.42
USP1O94782 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms