Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TMX2-CTNND1H3BSU7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 HNRNPDP1-201ENST00000439535 754 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AL591424.1-201ENST00000442569 1213 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AC112698.1-201ENST00000510299 916 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 OR7E14P-202ENST00000530490 1290 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AC021087.4-201ENST00000563761 564 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AC027601.4-201ENST00000611259 610 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 AD000864.1-201ENST00000624076 2295 ntBASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMX2-CTNND1H3BSU7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 FAM220CP-201ENST00000395253 831 ntBASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 MIR940-201ENST00000401276 94 ntBASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 AL049840.3-201ENST00000602669 611 ntBASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMX2-CTNND1H3BSU7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 FAM197Y3-203ENST00000618346 717 ntBASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 AC097374.2-201ENST00000618617 1306 ntBASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.17■□□□□ 0.34
TMX2-CTNND1H3BSU7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms