Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTCBQ9Y3I0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTCBQ9Y3I0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 TSPY16P-201ENST00000449843 468 ntBASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 KLF2P3-201ENST00000451977 1087 ntBASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 RN7SL204P-201ENST00000582831 262 ntBASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 AC046185.3-201ENST00000623228 1824 ntBASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.89■■□□□ 1.09
RTCBQ9Y3I0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 AL135744.1-201ENST00000565098 629 ntBASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.88■■□□□ 1.09
RTCBQ9Y3I0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 GPS2P2-201ENST00000430745 888 ntBASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 RARRES2P8-201ENST00000566335 367 ntBASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 AC012645.4-201ENST00000610691 1061 ntBASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.87■■□□□ 1.09
RTCBQ9Y3I0 AKAP8P1-201ENST00000434743 1349 ntBASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 MIR661-201ENST00000384842 89 ntBASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 AC107890.1-201ENST00000422478 521 ntBASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.86■■□□□ 1.09
RTCBQ9Y3I0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms