Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
LBX1P52954 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.53■□□□□ 0.72
LBX1P52954 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.53■□□□□ 0.72
LBX1P52954 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.53■□□□□ 0.72
LBX1P52954 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.53■□□□□ 0.72
LBX1P52954 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.53■□□□□ 0.72
LBX1P52954 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.53■□□□□ 0.72
LBX1P52954 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LBX1P52954 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.53■□□□□ 0.72
LBX1P52954 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LBX1P52954 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.52■□□□□ 0.72
LBX1P52954 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.52■□□□□ 0.72
LBX1P52954 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LBX1P52954 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.52■□□□□ 0.72
LBX1P52954 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LBX1P52954 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.52■□□□□ 0.72
LBX1P52954 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LBX1P52954 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.52■□□□□ 0.72
LBX1P52954 RARRES2P9-201ENST00000565168 469 ntBASIC19.52■□□□□ 0.72
LBX1P52954 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.52■□□□□ 0.72
LBX1P52954 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.52■□□□□ 0.72
LBX1P52954 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LBX1P52954 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.52■□□□□ 0.72
LBX1P52954 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LBX1P52954 GMCL1P1-201ENST00000463439 1581 ntBASIC19.52■□□□□ 0.71
LBX1P52954 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LBX1P52954 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.52■□□□□ 0.71
LBX1P52954 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LBX1P52954 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LBX1P52954 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LBX1P52954 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.51■□□□□ 0.71
LBX1P52954 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.51■□□□□ 0.71
LBX1P52954 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.51■□□□□ 0.71
LBX1P52954 AC093004.1-201ENST00000508850 424 ntBASIC19.51■□□□□ 0.71
LBX1P52954 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.51■□□□□ 0.71
LBX1P52954 MIR3615-201ENST00000581999 87 ntBASIC19.51■□□□□ 0.71
LBX1P52954 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
LBX1P52954 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LBX1P52954 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 AC006538.1-201ENST00000567905 1585 ntBASIC19.51■□□□□ 0.71
LBX1P52954 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.51■□□□□ 0.71
LBX1P52954 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.51■□□□□ 0.71
LBX1P52954 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LBX1P52954 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LBX1P52954 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LBX1P52954 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.5■□□□□ 0.71
LBX1P52954 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.5■□□□□ 0.71
LBX1P52954 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.5■□□□□ 0.71
LBX1P52954 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LBX1P52954 BOLA2P3-201ENST00000404566 256 ntBASIC19.5■□□□□ 0.71
LBX1P52954 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.5■□□□□ 0.71
LBX1P52954 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LBX1P52954 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.5■□□□□ 0.71
LBX1P52954 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LBX1P52954 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LBX1P52954 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.5■□□□□ 0.71
LBX1P52954 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms