Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Thbs1P35441 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Thbs1P35441 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.46□□□□□ -0.25
Thbs1P35441 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Thbs1P35441 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.46□□□□□ -0.25
Thbs1P35441 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.46□□□□□ -0.25
Thbs1P35441 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.46□□□□□ -0.25
Thbs1P35441 Gm17968-201ENSMUST00000194902 784 ntBASIC13.46□□□□□ -0.25
Thbs1P35441 Gm2213-201ENSMUST00000197485 688 ntBASIC13.46□□□□□ -0.25
Thbs1P35441 Gm44882-201ENSMUST00000205702 802 ntBASIC13.46□□□□□ -0.25
Thbs1P35441 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.46□□□□□ -0.25
Thbs1P35441 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.46□□□□□ -0.25
Thbs1P35441 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.46□□□□□ -0.25
Thbs1P35441 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Thbs1P35441 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Thbs1P35441 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Thbs1P35441 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.46□□□□□ -0.26
Thbs1P35441 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thbs1P35441 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thbs1P35441 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thbs1P35441 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Thbs1P35441 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Thbs1P35441 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.45□□□□□ -0.26
Thbs1P35441 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Thbs1P35441 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.45□□□□□ -0.26
Thbs1P35441 Gm4995-201ENSMUST00000117247 432 ntBASIC13.45□□□□□ -0.26
Thbs1P35441 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Gm27702-201ENSMUST00000184512 56 ntBASIC13.45□□□□□ -0.26
Thbs1P35441 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.45□□□□□ -0.26
Thbs1P35441 Gm45098-201ENSMUST00000207179 657 ntBASIC13.45□□□□□ -0.26
Thbs1P35441 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.45□□□□□ -0.26
Thbs1P35441 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Thbs1P35441 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Thbs1P35441 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thbs1P35441 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Thbs1P35441 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.44□□□□□ -0.26
Thbs1P35441 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.44□□□□□ -0.26
Thbs1P35441 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.44□□□□□ -0.26
Thbs1P35441 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.44□□□□□ -0.26
Thbs1P35441 Gm9385-201ENSMUST00000117563 472 ntBASIC13.44□□□□□ -0.26
Thbs1P35441 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.44□□□□□ -0.26
Thbs1P35441 Gm43930-201ENSMUST00000203868 845 ntBASIC13.44□□□□□ -0.26
Thbs1P35441 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Thbs1P35441 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.44□□□□□ -0.26
Thbs1P35441 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.44□□□□□ -0.26
Thbs1P35441 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thbs1P35441 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thbs1P35441 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thbs1P35441 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.43□□□□□ -0.26
Thbs1P35441 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms