Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.25■□□□□ 0.35
VARSP26640 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VARSP26640 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.25■□□□□ 0.35
VARSP26640 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
VARSP26640 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.24■□□□□ 0.35
VARSP26640 AD000864.1-201ENST00000624076 2295 ntBASIC17.24■□□□□ 0.35
VARSP26640 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.24■□□□□ 0.35
VARSP26640 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VARSP26640 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
VARSP26640 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 AC009949.1-201ENST00000623048 1830 ntBASIC17.24■□□□□ 0.35
VARSP26640 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 TSSC2-201ENST00000450217 709 ntBASIC17.24■□□□□ 0.35
VARSP26640 AC068472.1-201ENST00000474589 881 ntBASIC17.24■□□□□ 0.35
VARSP26640 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.24■□□□□ 0.35
VARSP26640 RN7SL510P-201ENST00000581311 263 ntBASIC17.24■□□□□ 0.35
VARSP26640 LINC01711-201ENST00000598340 967 ntBASIC17.24■□□□□ 0.35
VARSP26640 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VARSP26640 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
VARSP26640 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARSP26640 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 AL355312.1-201ENST00000407115 2176 ntBASIC17.23■□□□□ 0.35
VARSP26640 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
VARSP26640 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VARSP26640 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.23■□□□□ 0.35
VARSP26640 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.23■□□□□ 0.35
VARSP26640 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.23■□□□□ 0.35
VARSP26640 NUS1P1-201ENST00000446295 882 ntBASIC17.23■□□□□ 0.35
VARSP26640 KRT17P6-201ENST00000453795 1220 ntBASIC17.23■□□□□ 0.35
VARSP26640 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.23■□□□□ 0.35
VARSP26640 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VARSP26640 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.23■□□□□ 0.35
VARSP26640 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
VARSP26640 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.23■□□□□ 0.35
VARSP26640 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARSP26640 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.23■□□□□ 0.35
VARSP26640 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.22■□□□□ 0.35
VARSP26640 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.22■□□□□ 0.35
VARSP26640 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VARSP26640 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.22■□□□□ 0.35
VARSP26640 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.22■□□□□ 0.35
VARSP26640 MTCL1P1-201ENST00000446207 792 ntBASIC17.22■□□□□ 0.35
VARSP26640 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.22■□□□□ 0.35
VARSP26640 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms