Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
P01852 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
P01852 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
P01852 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.31□□□□□ -0.28
P01852 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P01852 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.31□□□□□ -0.28
P01852 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
P01852 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P01852 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.31□□□□□ -0.28
P01852 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.31□□□□□ -0.28
P01852 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.31□□□□□ -0.28
P01852 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01852 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.31□□□□□ -0.28
P01852 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.31□□□□□ -0.28
P01852 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P01852 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P01852 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01852 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
P01852 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P01852 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
P01852 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P01852 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.3□□□□□ -0.28
P01852 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.3□□□□□ -0.28
P01852 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.3□□□□□ -0.28
P01852 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.3□□□□□ -0.28
P01852 Gm13464-201ENSMUST00000119418 935 ntBASIC13.3□□□□□ -0.28
P01852 Gm15483-201ENSMUST00000120338 456 ntBASIC13.3□□□□□ -0.28
P01852 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
P01852 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
P01852 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
P01852 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.3□□□□□ -0.28
P01852 Gm44335-201ENSMUST00000196879 141 ntBASIC13.3□□□□□ -0.28
P01852 Gm44297-201ENSMUST00000198304 141 ntBASIC13.3□□□□□ -0.28
P01852 Gm44346-201ENSMUST00000198851 141 ntBASIC13.3□□□□□ -0.28
P01852 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.3□□□□□ -0.28
P01852 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.3□□□□□ -0.28
P01852 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.3□□□□□ -0.28
P01852 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Gm8396-201ENSMUST00000057361 823 ntBASIC13.3□□□□□ -0.28
P01852 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
P01852 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01852 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
P01852 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P01852 Gm2810-201ENSMUST00000118681 990 ntBASIC13.29□□□□□ -0.28
P01852 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.29□□□□□ -0.28
P01852 Gm43125-201ENSMUST00000201724 730 ntBASIC13.29□□□□□ -0.28
P01852 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.29□□□□□ -0.28
P01852 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P01852 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms