Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-CO1P00395 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-CO1P00395 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.96■□□□□ 0.47
MT-CO1P00395 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
MT-CO1P00395 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-CO1P00395 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MT-CO1P00395 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MT-CO1P00395 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
MT-CO1P00395 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MT-CO1P00395 PMPCAP1-201ENST00000508114 1576 ntBASIC17.96■□□□□ 0.46
MT-CO1P00395 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MT-CO1P00395 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MT-CO1P00395 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.95■□□□□ 0.46
MT-CO1P00395 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-CO1P00395 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.95■□□□□ 0.46
MT-CO1P00395 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-CO1P00395 SART3-203ENST00000546611 1184 ntBASIC17.95■□□□□ 0.46
MT-CO1P00395 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.95■□□□□ 0.46
MT-CO1P00395 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.95■□□□□ 0.46
MT-CO1P00395 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-CO1P00395 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.95■□□□□ 0.46
MT-CO1P00395 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.95■□□□□ 0.46
MT-CO1P00395 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MT-CO1P00395 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.95■□□□□ 0.46
MT-CO1P00395 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MT-CO1P00395 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-CO1P00395 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 BX276092.7-203ENST00000637198 1536 ntBASIC17.94■□□□□ 0.46
MT-CO1P00395 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MT-CO1P00395 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 AC103564.2-201ENST00000432853 1299 ntBASIC17.94■□□□□ 0.46
MT-CO1P00395 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.94■□□□□ 0.46
MT-CO1P00395 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.94■□□□□ 0.46
MT-CO1P00395 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.94■□□□□ 0.46
MT-CO1P00395 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 AC019129.2-201ENST00000609837 1235 ntBASIC17.94■□□□□ 0.46
MT-CO1P00395 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
MT-CO1P00395 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.94■□□□□ 0.46
MT-CO1P00395 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-CO1P00395 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-CO1P00395 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 AC004817.3-201ENST00000602957 2129 ntBASIC17.93■□□□□ 0.46
MT-CO1P00395 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MT-CO1P00395 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MT-CO1P00395 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.93■□□□□ 0.46
MT-CO1P00395 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MT-CO1P00395 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.93■□□□□ 0.46
MT-CO1P00395 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.93■□□□□ 0.46
MT-CO1P00395 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms