Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Snrnp48Q9D361 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Snrnp48Q9D361 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Snrnp48Q9D361 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Snrnp48Q9D361 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Snrnp48Q9D361 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Snrnp48Q9D361 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Snrnp48Q9D361 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Snrnp48Q9D361 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Snrnp48Q9D361 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Snrnp48Q9D361 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Snrnp48Q9D361 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Snrnp48Q9D361 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Snrnp48Q9D361 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.01■■□□□ 1.11
Snrnp48Q9D361 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.01■■□□□ 1.11
Snrnp48Q9D361 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
Snrnp48Q9D361 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Snrnp48Q9D361 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.01■■□□□ 1.11
Snrnp48Q9D361 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Snrnp48Q9D361 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Snrnp48Q9D361 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Snrnp48Q9D361 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22■■□□□ 1.11
Snrnp48Q9D361 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Snrnp48Q9D361 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22■■□□□ 1.11
Snrnp48Q9D361 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22■■□□□ 1.11
Snrnp48Q9D361 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Snrnp48Q9D361 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Snrnp48Q9D361 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Snrnp48Q9D361 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Snrnp48Q9D361 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.98■■□□□ 1.11
Snrnp48Q9D361 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Snrnp48Q9D361 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Snrnp48Q9D361 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Snrnp48Q9D361 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Snrnp48Q9D361 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Snrnp48Q9D361 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Snrnp48Q9D361 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
Snrnp48Q9D361 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.96■■□□□ 1.11
Snrnp48Q9D361 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.96■■□□□ 1.11
Snrnp48Q9D361 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Snrnp48Q9D361 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Snrnp48Q9D361 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Snrnp48Q9D361 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Snrnp48Q9D361 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Snrnp48Q9D361 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Snrnp48Q9D361 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.95■■□□□ 1.1
Snrnp48Q9D361 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Snrnp48Q9D361 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Snrnp48Q9D361 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Snrnp48Q9D361 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Snrnp48Q9D361 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.93■■□□□ 1.1
Snrnp48Q9D361 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.93■■□□□ 1.1
Snrnp48Q9D361 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Snrnp48Q9D361 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Snrnp48Q9D361 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Gm14523-201ENSMUST00000117260 558 ntBASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp48Q9D361 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Snrnp48Q9D361 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.91■■□□□ 1.1
Snrnp48Q9D361 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Snrnp48Q9D361 Gm22567-201ENSMUST00000175542 342 ntBASIC21.91■■□□□ 1.1
Snrnp48Q9D361 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.91■■□□□ 1.1
Snrnp48Q9D361 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Snrnp48Q9D361 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.9■■□□□ 1.1
Snrnp48Q9D361 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Snrnp48Q9D361 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Snrnp48Q9D361 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Snrnp48Q9D361 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Snrnp48Q9D361 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Snrnp48Q9D361 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Snrnp48Q9D361 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Snrnp48Q9D361 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Snrnp48Q9D361 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Snrnp48Q9D361 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Snrnp48Q9D361 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Snrnp48Q9D361 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Snrnp48Q9D361 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms