Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vsx1Q91V10 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.03■■□□□ 1.12
Vsx1Q91V10 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vsx1Q91V10 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vsx1Q91V10 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Vsx1Q91V10 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Vsx1Q91V10 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Vsx1Q91V10 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vsx1Q91V10 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vsx1Q91V10 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Vsx1Q91V10 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Vsx1Q91V10 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vsx1Q91V10 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Vsx1Q91V10 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Vsx1Q91V10 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Vsx1Q91V10 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vsx1Q91V10 Gm10232-201ENSMUST00000089221 720 ntBASIC21.99■■□□□ 1.11
Vsx1Q91V10 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Vsx1Q91V10 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vsx1Q91V10 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Vsx1Q91V10 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Vsx1Q91V10 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.98■■□□□ 1.11
Vsx1Q91V10 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Vsx1Q91V10 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vsx1Q91V10 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.97■■□□□ 1.11
Vsx1Q91V10 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.97■■□□□ 1.11
Vsx1Q91V10 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vsx1Q91V10 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vsx1Q91V10 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vsx1Q91V10 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Vsx1Q91V10 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vsx1Q91V10 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vsx1Q91V10 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Vsx1Q91V10 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.96■■□□□ 1.11
Vsx1Q91V10 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vsx1Q91V10 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vsx1Q91V10 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.94■■□□□ 1.1
Vsx1Q91V10 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Vsx1Q91V10 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.94■■□□□ 1.1
Vsx1Q91V10 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.94■■□□□ 1.1
Vsx1Q91V10 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vsx1Q91V10 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vsx1Q91V10 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vsx1Q91V10 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vsx1Q91V10 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vsx1Q91V10 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vsx1Q91V10 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vsx1Q91V10 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vsx1Q91V10 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.92■■□□□ 1.1
Vsx1Q91V10 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.92■■□□□ 1.1
Vsx1Q91V10 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.91■■□□□ 1.1
Vsx1Q91V10 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.91■■□□□ 1.1
Vsx1Q91V10 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.91■■□□□ 1.1
Vsx1Q91V10 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vsx1Q91V10 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vsx1Q91V10 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vsx1Q91V10 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.89■■□□□ 1.09
Vsx1Q91V10 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vsx1Q91V10 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vsx1Q91V10 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vsx1Q91V10 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vsx1Q91V10 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vsx1Q91V10 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vsx1Q91V10 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.88■■□□□ 1.09
Vsx1Q91V10 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Vsx1Q91V10 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vsx1Q91V10 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.88■■□□□ 1.09
Vsx1Q91V10 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vsx1Q91V10 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vsx1Q91V10 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Vsx1Q91V10 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vsx1Q91V10 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vsx1Q91V10 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vsx1Q91V10 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.87■■□□□ 1.09
Vsx1Q91V10 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.87■■□□□ 1.09
Vsx1Q91V10 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vsx1Q91V10 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vsx1Q91V10 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vsx1Q91V10 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vsx1Q91V10 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vsx1Q91V10 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vsx1Q91V10 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.85■■□□□ 1.09
Vsx1Q91V10 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Vsx1Q91V10 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vsx1Q91V10 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vsx1Q91V10 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.83■■□□□ 1.09
Vsx1Q91V10 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vsx1Q91V10 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Vsx1Q91V10 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vsx1Q91V10 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Vsx1Q91V10 Gm13241-201ENSMUST00000094493 780 ntBASIC21.83■■□□□ 1.09
Vsx1Q91V10 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Vsx1Q91V10 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.83■■□□□ 1.08
Vsx1Q91V10 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vsx1Q91V10 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vsx1Q91V10 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vsx1Q91V10 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vsx1Q91V10 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vsx1Q91V10 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vsx1Q91V10 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms