Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22■■□□□ 1.11
Zcchc9Q8R1J3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Zcchc9Q8R1J3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22■■□□□ 1.11
Zcchc9Q8R1J3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Zcchc9Q8R1J3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zcchc9Q8R1J3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zcchc9Q8R1J3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.99■■□□□ 1.11
Zcchc9Q8R1J3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.99■■□□□ 1.11
Zcchc9Q8R1J3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zcchc9Q8R1J3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Zcchc9Q8R1J3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Zcchc9Q8R1J3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Zcchc9Q8R1J3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.97■■□□□ 1.11
Zcchc9Q8R1J3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Zcchc9Q8R1J3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Zcchc9Q8R1J3 Rps24-207ENSMUST00000224568 714 ntBASIC21.96■■□□□ 1.11
Zcchc9Q8R1J3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Zcchc9Q8R1J3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Zcchc9Q8R1J3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Zcchc9Q8R1J3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Zcchc9Q8R1J3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Zcchc9Q8R1J3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Zcchc9Q8R1J3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Zcchc9Q8R1J3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zcchc9Q8R1J3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.94■■□□□ 1.1
Zcchc9Q8R1J3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Zcchc9Q8R1J3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zcchc9Q8R1J3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zcchc9Q8R1J3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zcchc9Q8R1J3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Zcchc9Q8R1J3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.92■■□□□ 1.1
Zcchc9Q8R1J3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Zcchc9Q8R1J3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Zcchc9Q8R1J3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Zcchc9Q8R1J3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Zcchc9Q8R1J3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.91■■□□□ 1.1
Zcchc9Q8R1J3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zcchc9Q8R1J3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.9■■□□□ 1.1
Zcchc9Q8R1J3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zcchc9Q8R1J3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zcchc9Q8R1J3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.9■■□□□ 1.1
Zcchc9Q8R1J3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Zcchc9Q8R1J3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Zcchc9Q8R1J3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zcchc9Q8R1J3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Zcchc9Q8R1J3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zcchc9Q8R1J3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zcchc9Q8R1J3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zcchc9Q8R1J3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zcchc9Q8R1J3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zcchc9Q8R1J3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zcchc9Q8R1J3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.86■■□□□ 1.09
Zcchc9Q8R1J3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Zcchc9Q8R1J3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.86■■□□□ 1.09
Zcchc9Q8R1J3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zcchc9Q8R1J3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zcchc9Q8R1J3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zcchc9Q8R1J3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Zcchc9Q8R1J3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zcchc9Q8R1J3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Zcchc9Q8R1J3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zcchc9Q8R1J3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Zcchc9Q8R1J3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Zcchc9Q8R1J3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zcchc9Q8R1J3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Zcchc9Q8R1J3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Zcchc9Q8R1J3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms