Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trnt1Q8K1J6 Gm11687-201ENSMUST00000118911 886 ntBASIC21.39■■□□□ 1.01
Trnt1Q8K1J6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.39■■□□□ 1.01
Trnt1Q8K1J6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Trnt1Q8K1J6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trnt1Q8K1J6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnt1Q8K1J6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Trnt1Q8K1J6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trnt1Q8K1J6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.38■■□□□ 1.01
Trnt1Q8K1J6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trnt1Q8K1J6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trnt1Q8K1J6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trnt1Q8K1J6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trnt1Q8K1J6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnt1Q8K1J6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnt1Q8K1J6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnt1Q8K1J6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trnt1Q8K1J6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trnt1Q8K1J6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trnt1Q8K1J6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trnt1Q8K1J6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trnt1Q8K1J6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trnt1Q8K1J6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trnt1Q8K1J6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trnt1Q8K1J6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.33■■□□□ 1
Trnt1Q8K1J6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.33■■□□□ 1
Trnt1Q8K1J6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trnt1Q8K1J6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trnt1Q8K1J6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trnt1Q8K1J6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trnt1Q8K1J6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trnt1Q8K1J6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trnt1Q8K1J6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.3■■□□□ 1
Trnt1Q8K1J6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trnt1Q8K1J6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trnt1Q8K1J6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trnt1Q8K1J6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.28■■□□□ 1
Trnt1Q8K1J6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trnt1Q8K1J6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trnt1Q8K1J6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trnt1Q8K1J6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trnt1Q8K1J6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trnt1Q8K1J6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trnt1Q8K1J6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.27■■□□□ 1
Trnt1Q8K1J6 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.27■■□□□ 1
Trnt1Q8K1J6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trnt1Q8K1J6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.27■□□□□ 0.99
Trnt1Q8K1J6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trnt1Q8K1J6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnt1Q8K1J6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnt1Q8K1J6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trnt1Q8K1J6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnt1Q8K1J6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trnt1Q8K1J6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.25■□□□□ 0.99
Trnt1Q8K1J6 Gm11175-201ENSMUST00000116172 543 ntBASIC21.25■□□□□ 0.99
Trnt1Q8K1J6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trnt1Q8K1J6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trnt1Q8K1J6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.24■□□□□ 0.99
Trnt1Q8K1J6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trnt1Q8K1J6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trnt1Q8K1J6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trnt1Q8K1J6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Trnt1Q8K1J6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trnt1Q8K1J6 Gm22567-201ENSMUST00000175542 342 ntBASIC21.23■□□□□ 0.99
Trnt1Q8K1J6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnt1Q8K1J6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.22■□□□□ 0.99
Trnt1Q8K1J6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnt1Q8K1J6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnt1Q8K1J6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trnt1Q8K1J6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trnt1Q8K1J6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 631.1 ms