Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp28Q8CGV8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp28Q8CGV8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp28Q8CGV8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp28Q8CGV8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp28Q8CGV8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp28Q8CGV8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp28Q8CGV8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp28Q8CGV8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms