Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shisa4Q8CA71 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.15■■□□□ 1.78
Shisa4Q8CA71 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Shisa4Q8CA71 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shisa4Q8CA71 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
Shisa4Q8CA71 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.15■■□□□ 1.78
Shisa4Q8CA71 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Shisa4Q8CA71 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shisa4Q8CA71 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Shisa4Q8CA71 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Shisa4Q8CA71 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Shisa4Q8CA71 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.14■■□□□ 1.78
Shisa4Q8CA71 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shisa4Q8CA71 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shisa4Q8CA71 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Shisa4Q8CA71 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Shisa4Q8CA71 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shisa4Q8CA71 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.13■■□□□ 1.77
Shisa4Q8CA71 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shisa4Q8CA71 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shisa4Q8CA71 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shisa4Q8CA71 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.12■■□□□ 1.77
Shisa4Q8CA71 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Shisa4Q8CA71 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shisa4Q8CA71 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Shisa4Q8CA71 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Shisa4Q8CA71 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Shisa4Q8CA71 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.11■■□□□ 1.77
Shisa4Q8CA71 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shisa4Q8CA71 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shisa4Q8CA71 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shisa4Q8CA71 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Shisa4Q8CA71 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shisa4Q8CA71 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shisa4Q8CA71 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shisa4Q8CA71 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Shisa4Q8CA71 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shisa4Q8CA71 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shisa4Q8CA71 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.08■■□□□ 1.77
Shisa4Q8CA71 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Shisa4Q8CA71 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Shisa4Q8CA71 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Shisa4Q8CA71 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Shisa4Q8CA71 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Shisa4Q8CA71 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.06■■□□□ 1.76
Shisa4Q8CA71 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Shisa4Q8CA71 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Shisa4Q8CA71 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.05■■□□□ 1.76
Shisa4Q8CA71 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Shisa4Q8CA71 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shisa4Q8CA71 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shisa4Q8CA71 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shisa4Q8CA71 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Shisa4Q8CA71 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Shisa4Q8CA71 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shisa4Q8CA71 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shisa4Q8CA71 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.03■■□□□ 1.76
Shisa4Q8CA71 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Shisa4Q8CA71 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.03■■□□□ 1.76
Shisa4Q8CA71 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Shisa4Q8CA71 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shisa4Q8CA71 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shisa4Q8CA71 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.02■■□□□ 1.76
Shisa4Q8CA71 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Shisa4Q8CA71 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shisa4Q8CA71 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shisa4Q8CA71 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Shisa4Q8CA71 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Shisa4Q8CA71 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26■■□□□ 1.75
Shisa4Q8CA71 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26■■□□□ 1.75
Shisa4Q8CA71 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Shisa4Q8CA71 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26■■□□□ 1.75
Shisa4Q8CA71 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shisa4Q8CA71 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.99■■□□□ 1.75
Shisa4Q8CA71 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Shisa4Q8CA71 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Shisa4Q8CA71 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Shisa4Q8CA71 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shisa4Q8CA71 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shisa4Q8CA71 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Shisa4Q8CA71 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Shisa4Q8CA71 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.96■■□□□ 1.75
Shisa4Q8CA71 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Shisa4Q8CA71 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Shisa4Q8CA71 Gm10420-201ENSMUST00000121713 882 ntBASIC25.95■■□□□ 1.74
Shisa4Q8CA71 Gm22567-201ENSMUST00000175542 342 ntBASIC25.95■■□□□ 1.74
Shisa4Q8CA71 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Shisa4Q8CA71 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Shisa4Q8CA71 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Shisa4Q8CA71 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Shisa4Q8CA71 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.94■■□□□ 1.74
Shisa4Q8CA71 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Shisa4Q8CA71 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Shisa4Q8CA71 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shisa4Q8CA71 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shisa4Q8CA71 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shisa4Q8CA71 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shisa4Q8CA71 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Shisa4Q8CA71 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Shisa4Q8CA71 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms