Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc46a2Q8CA03 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc46a2Q8CA03 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Slc46a2Q8CA03 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc46a2Q8CA03 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc46a2Q8CA03 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc46a2Q8CA03 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc46a2Q8CA03 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a2Q8CA03 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a2Q8CA03 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a2Q8CA03 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc46a2Q8CA03 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc46a2Q8CA03 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc46a2Q8CA03 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.22■□□□□ 0.99
Slc46a2Q8CA03 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc46a2Q8CA03 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc46a2Q8CA03 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc46a2Q8CA03 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc46a2Q8CA03 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.21■□□□□ 0.99
Slc46a2Q8CA03 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc46a2Q8CA03 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.21■□□□□ 0.99
Slc46a2Q8CA03 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc46a2Q8CA03 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc46a2Q8CA03 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc46a2Q8CA03 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.19■□□□□ 0.98
Slc46a2Q8CA03 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc46a2Q8CA03 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc46a2Q8CA03 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Slc46a2Q8CA03 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slc46a2Q8CA03 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Slc46a2Q8CA03 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc46a2Q8CA03 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Slc46a2Q8CA03 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc46a2Q8CA03 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc46a2Q8CA03 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc46a2Q8CA03 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc46a2Q8CA03 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc46a2Q8CA03 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc46a2Q8CA03 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc46a2Q8CA03 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc46a2Q8CA03 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc46a2Q8CA03 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.15■□□□□ 0.98
Slc46a2Q8CA03 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc46a2Q8CA03 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc46a2Q8CA03 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc46a2Q8CA03 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Slc46a2Q8CA03 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc46a2Q8CA03 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Slc46a2Q8CA03 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc46a2Q8CA03 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Gm22567-201ENSMUST00000175542 342 ntBASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc46a2Q8CA03 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a2Q8CA03 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a2Q8CA03 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a2Q8CA03 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc46a2Q8CA03 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a2Q8CA03 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a2Q8CA03 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a2Q8CA03 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc46a2Q8CA03 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Slc46a2Q8CA03 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc46a2Q8CA03 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc46a2Q8CA03 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc46a2Q8CA03 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Slc46a2Q8CA03 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms