Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tsen54Q8C2A2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.39■□□□□ 0.53
Tsen54Q8C2A2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.39■□□□□ 0.53
Tsen54Q8C2A2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.35■□□□□ 0.53
Tsen54Q8C2A2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tsen54Q8C2A2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tsen54Q8C2A2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tsen54Q8C2A2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.33■□□□□ 0.53
Tsen54Q8C2A2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tsen54Q8C2A2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Particl-201ENSMUST00000205370 1560 ntBASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tsen54Q8C2A2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsen54Q8C2A2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsen54Q8C2A2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Gm30023-201ENSMUST00000197970 889 ntBASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms