Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsen54Q8C2A2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tsen54Q8C2A2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.39■□□□□ 0.53
Tsen54Q8C2A2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.39■□□□□ 0.53
Tsen54Q8C2A2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsen54Q8C2A2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsen54Q8C2A2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tsen54Q8C2A2 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.35■□□□□ 0.53
Tsen54Q8C2A2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tsen54Q8C2A2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tsen54Q8C2A2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.34■□□□□ 0.53
Tsen54Q8C2A2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tsen54Q8C2A2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.33■□□□□ 0.53
Tsen54Q8C2A2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tsen54Q8C2A2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Particl-201ENSMUST00000205370 1560 ntBASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.33■□□□□ 0.52
Tsen54Q8C2A2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tsen54Q8C2A2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsen54Q8C2A2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsen54Q8C2A2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsen54Q8C2A2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tsen54Q8C2A2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tsen54Q8C2A2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tsen54Q8C2A2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tsen54Q8C2A2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Gm30023-201ENSMUST00000197970 889 ntBASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.26■□□□□ 0.51
Tsen54Q8C2A2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms