Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpsf7Q8BTV2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cpsf7Q8BTV2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cpsf7Q8BTV2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpsf7Q8BTV2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpsf7Q8BTV2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cpsf7Q8BTV2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cpsf7Q8BTV2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cpsf7Q8BTV2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cpsf7Q8BTV2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cpsf7Q8BTV2 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpsf7Q8BTV2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cpsf7Q8BTV2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.08■■□□□ 1.13
Cpsf7Q8BTV2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cpsf7Q8BTV2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.06■■□□□ 1.12
Cpsf7Q8BTV2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpsf7Q8BTV2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpsf7Q8BTV2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpsf7Q8BTV2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.05■■□□□ 1.12
Cpsf7Q8BTV2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpsf7Q8BTV2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpsf7Q8BTV2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpsf7Q8BTV2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpsf7Q8BTV2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpsf7Q8BTV2 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.03■■□□□ 1.12
Cpsf7Q8BTV2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpsf7Q8BTV2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf7Q8BTV2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf7Q8BTV2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf7Q8BTV2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf7Q8BTV2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf7Q8BTV2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Cpsf7Q8BTV2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Cpsf7Q8BTV2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpsf7Q8BTV2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Cpsf7Q8BTV2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.01■■□□□ 1.11
Cpsf7Q8BTV2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpsf7Q8BTV2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cpsf7Q8BTV2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Cpsf7Q8BTV2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22■■□□□ 1.11
Cpsf7Q8BTV2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cpsf7Q8BTV2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cpsf7Q8BTV2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Cpsf7Q8BTV2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Cpsf7Q8BTV2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cpsf7Q8BTV2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cpsf7Q8BTV2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cpsf7Q8BTV2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Cpsf7Q8BTV2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cpsf7Q8BTV2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cpsf7Q8BTV2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cpsf7Q8BTV2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.96■■□□□ 1.11
Cpsf7Q8BTV2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 129.5 ms