Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SynbQ8BI41 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SynbQ8BI41 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SynbQ8BI41 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynbQ8BI41 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynbQ8BI41 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynbQ8BI41 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynbQ8BI41 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SynbQ8BI41 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SynbQ8BI41 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SynbQ8BI41 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SynbQ8BI41 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SynbQ8BI41 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SynbQ8BI41 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SynbQ8BI41 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SynbQ8BI41 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.91■□□□□ 0.94
SynbQ8BI41 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SynbQ8BI41 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynbQ8BI41 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynbQ8BI41 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynbQ8BI41 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.9■□□□□ 0.94
SynbQ8BI41 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SynbQ8BI41 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.9■□□□□ 0.94
SynbQ8BI41 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynbQ8BI41 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SynbQ8BI41 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SynbQ8BI41 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SynbQ8BI41 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SynbQ8BI41 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.89■□□□□ 0.93
SynbQ8BI41 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SynbQ8BI41 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SynbQ8BI41 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.88■□□□□ 0.93
SynbQ8BI41 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SynbQ8BI41 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.88■□□□□ 0.93
SynbQ8BI41 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SynbQ8BI41 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynbQ8BI41 Gm43566-201ENSMUST00000196851 808 ntBASIC20.87■□□□□ 0.93
SynbQ8BI41 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SynbQ8BI41 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SynbQ8BI41 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynbQ8BI41 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynbQ8BI41 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SynbQ8BI41 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SynbQ8BI41 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SynbQ8BI41 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.86■□□□□ 0.93
SynbQ8BI41 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SynbQ8BI41 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.86■□□□□ 0.93
SynbQ8BI41 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SynbQ8BI41 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SynbQ8BI41 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.85■□□□□ 0.93
SynbQ8BI41 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SynbQ8BI41 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.85■□□□□ 0.93
SynbQ8BI41 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SynbQ8BI41 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynbQ8BI41 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.84■□□□□ 0.93
SynbQ8BI41 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.84■□□□□ 0.93
SynbQ8BI41 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynbQ8BI41 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SynbQ8BI41 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SynbQ8BI41 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.83■□□□□ 0.93
SynbQ8BI41 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SynbQ8BI41 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SynbQ8BI41 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SynbQ8BI41 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SynbQ8BI41 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SynbQ8BI41 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SynbQ8BI41 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SynbQ8BI41 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SynbQ8BI41 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SynbQ8BI41 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SynbQ8BI41 Gm45444-201ENSMUST00000211394 898 ntBASIC20.81■□□□□ 0.92
SynbQ8BI41 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.81■□□□□ 0.92
SynbQ8BI41 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SynbQ8BI41 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SynbQ8BI41 Gm13238-201ENSMUST00000117655 780 ntBASIC20.8■□□□□ 0.92
SynbQ8BI41 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.79■□□□□ 0.92
SynbQ8BI41 Gm15820-201ENSMUST00000201566 728 ntBASIC20.79■□□□□ 0.92
SynbQ8BI41 Rps24-207ENSMUST00000224568 714 ntBASIC20.79■□□□□ 0.92
SynbQ8BI41 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SynbQ8BI41 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SynbQ8BI41 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SynbQ8BI41 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
SynbQ8BI41 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SynbQ8BI41 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.78■□□□□ 0.92
SynbQ8BI41 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SynbQ8BI41 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SynbQ8BI41 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms